PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G096700.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 251aa    MW: 27772.7 Da    PI: 9.5356
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G096700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-08159199954
                        HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  Aqcoe6G096700.1.p 159 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 199
                        699*****************87.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.294150199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.0E-14151209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.74E-11152204No hitNo description
SuperFamilySSF474592.22E-14154209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.9E-14156205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.4E-6160199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010500Biological Processtransmitting tissue development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048462Biological Processcarpel formation
GO:2000012Biological Processregulation of auxin polar transport
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MDVDLLKSAT EDQMEMMMML QMDKLSDFFG HYSEVPSAEL SSGSGTSVDP TLPMFDNTNS  60
NSSTLCSPSS ISFINNTVQE PMTLAMLSHS MPGKLRNGGE FSNPSAFSSP SQKRNSMAAM  120
REMIFRIAAM QPIHIDPESV KPPKRRNVKI SKDPQSVAAR HRRERISEKI RILQRLVPGG  180
TKMDTASMLD EAIHYVKFLK NQVQSLERAT TSRPNTGFGF PATSVCNPNH SSLTRAYQPV  240
QMFSSNQMLS *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002282817.12e-89PREDICTED: transcription factor HEC1
SwissprotQ9FHA72e-48HEC1_ARATH; Transcription factor HEC1
TrEMBLE0CPU43e-89E0CPU4_VITVI; Putative uncharacterized protein
STRINGVIT_18s0001g10400.t018e-89(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.15e-49bHLH family protein